| Team | Conference | Seed | Region | W | L |
| Iowa | Big Ten Conference | 7 | 1 | 17 | 16 |
| Tennessee | Southeastern Conference | 1 | 2 | 18 | 14 |
| Northwestern | Big Ten Conference | 4 | 1 | 18 | 13 |
| LSU | Southeastern Conference | 6 | 1 | 18 | 14 |
| Miami (Fla.) | Atlantic Coast Conference | 2 | 2 | 19 | 12 |
| Minnesota | Big Ten Conference | 6 | 2 | 19 | 14 |
| Northern Iowa | Missouri Valley Conference | 7 | 3 | 19 | 13 |
| Seton Hall | Big East Conference | 1 | 3 | 20 | 12 |
| Dayton | Atlantic 10 Conference | 2 | 1 | 20 | 12 |
| Saint Joseph's | Atlantic 10 Conference | 2 | 3 | 20 | 13 |
| Mississippi | Southeastern Conference | 2 | 4 | 20 | 13 |
| Illinois State | Missouri Valley Conference | 7 | 4 | 20 | 13 |
| Washington | Pacific 12 Conference | 1 | 1 | 21 | 10 |
| La Salle | Atlantic 10 Conference | 3 | 2 | 21 | 12 |
| Stanford | Pacific 12 Conference | 3 | 4 | 21 | 11 |
| Mississippi State | Southeastern Conference | 4 | 3 | 21 | 11 |
| Marshall | Conference USA | 5 | 2 | 21 | 13 |
| Savannah State | Mid Eastern Athletic Conference | 8 | 2 | 21 | 11 |
| Oregon | Pacific 12 Conference | 3 | 1 | 22 | 9 |
| Akron | Mid American Conference | 5 | 1 | 22 | 11 |
| Massachusetts | Atlantic 10 Conference | 5 | 3 | 22 | 11 |
| UCF | Conference USA | 6 | 3 | 22 | 10 |
| Cleveland State | Horizon League | 6 | 4 | 22 | 10 |
| Valparaiso | Horizon League | 7 | 2 | 22 | 11 |
| Stony Brook | America East Conference | 8 | 3 | 22 | 9 |
| Arizona | Pacific 12 Conference | 1 | 4 | 23 | 11 |
| Texas-Arlington | Southland Conference | 8 | 1 | 24 | 8 |
| Bucknell | Patriot League | 8 | 4 | 24 | 9 |
| Middle Tennessee | Sun Belt Conference | 4 | 2 | 25 | 6 |
| Nevada | Western Athletic Conference | 5 | 4 | 26 | 6 |
| Drexel | Colonial Athletic Assn | 3 | 3 | 27 | 6 |
| Oral Roberts | Summit League | 4 | 4 | 27 | 6 |
2013 College World Series
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